IL_8YLD_137
3D structure
- PDB id
- 8YLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUCUAGACAG*CCGAAUG
- Length
- 18 nucleotides
- Bulged bases
- 8YLD|1|A|A|1221
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YLD|1|A|C|1216
8YLD|1|A|A|1217
8YLD|1|A|U|1218
8YLD|1|A|C|1219
8YLD|1|A|U|1220
8YLD|1|A|A|1221
8YLD|1|A|G|1222
8YLD|1|A|A|1223
8YLD|1|A|C|1224
8YLD|1|A|A|1225
8YLD|1|A|G|1226
*
8YLD|1|A|C|1283
8YLD|1|A|C|1284
8YLD|1|A|G|1285
8YLD|1|A|A|1286
8YLD|1|A|A|1287
8YLD|1|A|U|1288
8YLD|1|A|G|1289
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL6A
- Chain L
- Large ribosomal subunit protein uL16
- Chain U
- Large ribosomal subunit protein eL20A
- Chain o
- Large ribosomal subunit protein eL40A
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