IL_8YLD_147
3D structure
- PDB id
- 8YLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAUUCUUC*GGAAUAGUUUUC
- Length
- 21 nucleotides
- Bulged bases
- 8YLD|1|A|U|1629, 8YLD|1|A|U|1815, 8YLD|1|A|U|1820, 8YLD|1|A|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YLD|1|A|G|1623
8YLD|1|A|G|1624
8YLD|1|A|A|1625
8YLD|1|A|U|1626
8YLD|1|A|U|1627
8YLD|1|A|C|1628
8YLD|1|A|U|1629
8YLD|1|A|U|1630
8YLD|1|A|C|1631
*
8YLD|1|A|G|1811
8YLD|1|A|G|1812
8YLD|1|A|A|1813
8YLD|1|A|A|1814
8YLD|1|A|U|1815
8YLD|1|A|A|1816
8YLD|1|A|G|1817
8YLD|1|A|U|1818
8YLD|1|A|U|1819
8YLD|1|A|U|1820
8YLD|1|A|U|1821
8YLD|1|A|C|1822
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain b
- Large ribosomal subunit protein eL27A
- Chain i
- Large ribosomal subunit protein eL34A
- Chain m
- Large ribosomal subunit protein eL38
Coloring options: