IL_8YLD_179
3D structure
- PDB id
- 8YLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAG*CGCCAGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YLD|1|A|G|2466
8YLD|1|A|G|2467
8YLD|1|A|A|2468
8YLD|1|A|G|2469
*
8YLD|1|A|C|2476
8YLD|1|A|G|2477
8YLD|1|A|C|2478
8YLD|1|A|C|2479
8YLD|1|A|A|2480
8YLD|1|A|G|2481
8YLD|1|A|U|2482
8YLD|1|A|G|2483
8YLD|1|A|A|2484
8YLD|1|A|A|2485
8YLD|1|A|A|2486
8YLD|1|A|U|2487
8YLD|1|A|A|2488
8YLD|1|A|C|2489
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain SK
- Small ribosomal subunit protein eS25A
- Chain t
- Transfer RNA; tRNA
Coloring options: