IL_8YP6_033

3D structure

PDB id

8YP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM map of 30S ribosomal subunit in complex with MetAP1c of Mycobacterium smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGAAUU*AGGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8YP6|1|a|G|653
8YP6|1|a|G|654
8YP6|1|a|A|655
8YP6|1|a|A|656
8YP6|1|a|U|657
8YP6|1|a|U|658
*
8YP6|1|a|A|692
8YP6|1|a|G|693
8YP6|1|a|G|694
8YP6|1|a|A|695
8YP6|1|a|A|696
8YP6|1|a|C|697

Current chains

Chain a

16S rRNA

Nearby chains

Chain f

Small ribosomal subunit protein bS6

Chain k

Small ribosomal subunit protein uS11

Chain r

Small ribosomal subunit protein bS18B