IL_8YUO_083
3D structure
- PDB id
- 8YUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- UU*GGA
- Length
- 5 nucleotides
- Bulged bases
- 8YUO|1|a|G|729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8YUO_083 not in the Motif Atlas
- Homologous match to IL_5J7L_262
- Geometric discrepancy: 0.0538
- The information below is about IL_5J7L_262
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
8YUO|1|a|U|702
8YUO|1|a|U|703
*
8YUO|1|a|G|728
8YUO|1|a|G|729
8YUO|1|a|A|730
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: