IL_8YUQ_104

3D structure

PDB id

8YUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

8YUQ|1|a|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8YUQ|1|a|C|1043
8YUQ|1|a|C|1044
8YUQ|1|a|C|1045
8YUQ|1|a|A|1046
8YUQ|1|a|G|1047
8YUQ|1|a|A|1048
8YUQ|1|a|C|1049
8YUQ|1|a|A|1050
8YUQ|1|a|G|1051
8YUQ|1|a|C|1052
*
8YUQ|1|a|G|1107
8YUQ|1|a|U|1108
8YUQ|1|a|C|1109
8YUQ|1|a|G|1110
8YUQ|1|a|A|1111
8YUQ|1|a|G|1112

Current chains

Chain a

23S rRNA

Nearby chains

Chain g

50S ribosomal protein L6