IL_8Z70_007
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 8Z70|1|2|U|66, 8Z70|1|2|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_007 not in the Motif Atlas
- Homologous match to IL_8P9A_379
- Geometric discrepancy: 0.2245
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Z70|1|2|U|64
8Z70|1|2|A|65
8Z70|1|2|U|66
8Z70|1|2|A|67
8Z70|1|2|A|68
8Z70|1|2|G|69
*
8Z70|1|2|U|82
8Z70|1|2|G|83
8Z70|1|2|A|84
8Z70|1|2|A|85
8Z70|1|2|A|86
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
- Chain Sd
- Small ribosomal subunit protein eS24A
- Chain Y
- Large ribosomal subunit protein eL24A
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