IL_8Z70_014
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUA*UUUUC
- Length
- 8 nucleotides
- Bulged bases
- 8Z70|1|2|U|260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_014 not in the Motif Atlas
- Homologous match to IL_8P9A_386
- Geometric discrepancy: 0.474
- The information below is about IL_8P9A_386
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
8Z70|1|2|G|204
8Z70|1|2|U|205
8Z70|1|2|A|206
*
8Z70|1|2|U|259
8Z70|1|2|U|260
8Z70|1|2|U|261
8Z70|1|2|U|262
8Z70|1|2|C|263
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SV
- Small ribosomal subunit protein eS8A
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