IL_8Z70_067
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 8Z70|1|2|U|1432, 8Z70|1|2|G|1435
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_067 not in the Motif Atlas
- Homologous match to IL_8P9A_440
- Geometric discrepancy: 0.1875
- The information below is about IL_8P9A_440
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49061.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8Z70|1|2|U|1276
8Z70|1|2|G|1277
8Z70|1|2|G|1278
*
8Z70|1|2|U|1430
8Z70|1|2|C|1431
8Z70|1|2|U|1432
8Z70|1|2|G|1433
8Z70|1|2|U|1434
8Z70|1|2|G|1435
8Z70|1|2|A|1436
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS3
- Chain SC
- Small ribosomal subunit protein eS10A
- Chain SJ
- Small ribosomal subunit protein uS10
- Chain SM
- Small ribosomal subunit protein uS14A
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