IL_8Z70_097
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUAGUAA*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_097 not in the Motif Atlas
- Homologous match to IL_8P9A_235
- Geometric discrepancy: 0.2055
- The information below is about IL_8P9A_235
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_53348.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
8Z70|1|A|C|82
8Z70|1|A|U|83
8Z70|1|A|U|84
8Z70|1|A|A|85
8Z70|1|A|G|86
8Z70|1|A|U|87
8Z70|1|A|A|88
8Z70|1|A|A|89
*
8Z70|1|A|U|97
8Z70|1|A|G|98
8Z70|1|A|A|99
8Z70|1|A|A|100
8Z70|1|A|G|101
8Z70|1|A|C|102
8Z70|1|A|G|103
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain N
- Large ribosomal subunit protein eL13A
- Chain P
- Large ribosomal subunit protein eL15A
- Chain S
- Large ribosomal subunit protein eL18A
- Chain c
- Large ribosomal subunit protein uL15
Coloring options: