IL_8Z70_110
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGG*UGCAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Z70_110 not in the Motif Atlas
- Homologous match to IL_8P9A_251
- Geometric discrepancy: 0.1491
- The information below is about IL_8P9A_251
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- No text annotation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
8Z70|1|A|G|725
8Z70|1|A|G|726
8Z70|1|A|G|727
8Z70|1|A|G|728
*
8Z70|1|A|U|741
8Z70|1|A|G|742
8Z70|1|A|C|743
8Z70|1|A|A|744
8Z70|1|A|C|745
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain S
- Large ribosomal subunit protein eL18A
- Chain d
- Large ribosomal subunit protein eL29
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