IL_8Z70_157

3D structure

PDB id

8Z70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAUAAUG*CUAUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Z70|1|A|G|1882
8Z70|1|A|A|1883
8Z70|1|A|A|1884
8Z70|1|A|U|1885
8Z70|1|A|A|1886
8Z70|1|A|A|1887
8Z70|1|A|U|1888
8Z70|1|A|G|1889
*
8Z70|1|A|C|2346
8Z70|1|A|U|2347
8Z70|1|A|A|2348
8Z70|1|A|U|2349
8Z70|1|A|C|2350

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3

Chain R

Large ribosomal subunit protein uL22A

Chain f

Large ribosomal subunit protein eL31A