IL_8Z71_125
3D structure
- PDB id
- 8Z71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGGUAAA*UUUAAAUAU
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Z71|1|A|G|991
8Z71|1|A|A|992
8Z71|1|A|G|993
8Z71|1|A|G|994
8Z71|1|A|U|995
8Z71|1|A|A|996
8Z71|1|A|A|997
8Z71|1|A|A|998
*
8Z71|1|A|U|1050
8Z71|1|A|U|1051
8Z71|1|A|U|1052
8Z71|1|A|A|1053
8Z71|1|A|A|1054
8Z71|1|A|A|1055
8Z71|1|A|U|1056
8Z71|1|A|A|1057
8Z71|1|A|U|1058
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain G
- Large ribosomal subunit protein uL18
- Chain I
- Large ribosomal subunit protein uL30A
- Chain L
- Large ribosomal subunit protein uL16
- Chain V
- Large ribosomal subunit protein eL21A
Coloring options: