IL_8Z71_180

3D structure

PDB id

8Z71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGUGUAGAAUAAG*CUACC

Length

19 nucleotides

Bulged bases

8Z71|1|A|U|2453, 8Z71|1|A|A|2458, 8Z71|1|A|U|2460

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Z71|1|A|G|2450
8Z71|1|A|G|2451
8Z71|1|A|G|2452
8Z71|1|A|U|2453
8Z71|1|A|G|2454
8Z71|1|A|U|2455
8Z71|1|A|A|2456
8Z71|1|A|G|2457
8Z71|1|A|A|2458
8Z71|1|A|A|2459
8Z71|1|A|U|2460
8Z71|1|A|A|2461
8Z71|1|A|A|2462
8Z71|1|A|G|2463
*
8Z71|1|A|C|2492
8Z71|1|A|U|2493
8Z71|1|A|A|2494
8Z71|1|A|C|2495
8Z71|1|A|C|2496

Current chains

Chain A

25S rRNA

Nearby chains