IL_8Z71_181

3D structure

PDB id

8Z71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAG*CGCCAGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Z71|1|A|G|2466
8Z71|1|A|G|2467
8Z71|1|A|A|2468
8Z71|1|A|G|2469
*
8Z71|1|A|C|2476
8Z71|1|A|G|2477
8Z71|1|A|C|2478
8Z71|1|A|C|2479
8Z71|1|A|A|2480
8Z71|1|A|G|2481
8Z71|1|A|U|2482
8Z71|1|A|G|2483
8Z71|1|A|A|2484
8Z71|1|A|A|2485
8Z71|1|A|A|2486
8Z71|1|A|U|2487
8Z71|1|A|A|2488
8Z71|1|A|C|2489

Current chains

Chain A

25S rRNA

Nearby chains