IL_8ZFG_073

3D structure

PDB id

8ZFG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.68 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZFG_073 not in the Motif Atlas

Geometric match to IL_8B0X_073

Geometric discrepancy: 0.2665

The information below is about IL_8B0X_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22028.1

Basepair signature

cWW-L-R-L-R-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8ZFG|1|a|C|274
8ZFG|1|a|C|275
8ZFG|1|a|U|276
8ZFG|1|a|G|277
8ZFG|1|a|A|278
8ZFG|1|a|A|279
8ZFG|1|a|U|280
8ZFG|1|a|C|281
*
8ZFG|1|a|G|359
8ZFG|1|a|U|360
8ZFG|1|a|G|361
8ZFG|1|a|A|362
8ZFG|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains