IL_8ZFG_104

3D structure

PDB id

8ZFG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.68 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

8ZFG|1|a|C|1045, 8ZFG|1|a|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFG|1|a|C|1043
8ZFG|1|a|C|1044
8ZFG|1|a|C|1045
8ZFG|1|a|A|1046
8ZFG|1|a|G|1047
8ZFG|1|a|A|1048
8ZFG|1|a|C|1049
8ZFG|1|a|A|1050
8ZFG|1|a|G|1051
8ZFG|1|a|C|1052
*
8ZFG|1|a|G|1107
8ZFG|1|a|U|1108
8ZFG|1|a|C|1109
8ZFG|1|a|G|1110
8ZFG|1|a|A|1111
8ZFG|1|a|G|1112

Current chains

Chain a

23S rRNA

Nearby chains

Chain g

Large ribosomal subunit protein uL6