IL_8ZFI_075
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 8ZFI|1|b|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFI_075 not in the Motif Atlas
- Geometric match to IL_5J7L_248
- Geometric discrepancy: 0.1499
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
8ZFI|1|b|G|81
8ZFI|1|b|U|82
8ZFI|1|b|A|83
8ZFI|1|b|A|84
8ZFI|1|b|G|85
*
8ZFI|1|b|C|97
8ZFI|1|b|G|98
8ZFI|1|b|U|99
8ZFI|1|b|U|100
8ZFI|1|b|A|101
8ZFI|1|b|U|102
8ZFI|1|b|A|103
8ZFI|1|b|A|104
8ZFI|1|b|C|105
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain v
- 50S ribosomal protein L24
Coloring options: