IL_8ZFI_102

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

8ZFI|1|b|A|899

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|G|875
8ZFI|1|b|C|876
8ZFI|1|b|A|877
8ZFI|1|b|A|878
8ZFI|1|b|G|879
*
8ZFI|1|b|C|898
8ZFI|1|b|A|899
8ZFI|1|b|A|900
8ZFI|1|b|C|901
8ZFI|1|b|C|902

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain n

50S ribosomal protein L16