IL_8ZFI_111

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

8ZFI|1|b|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|C|1043
8ZFI|1|b|C|1044
8ZFI|1|b|C|1045
8ZFI|1|b|A|1046
8ZFI|1|b|G|1047
8ZFI|1|b|A|1048
8ZFI|1|b|C|1049
8ZFI|1|b|A|1050
8ZFI|1|b|G|1051
8ZFI|1|b|C|1052
8ZFI|1|b|C|1053
*
8ZFI|1|b|G|1106
8ZFI|1|b|G|1107
8ZFI|1|b|U|1108
8ZFI|1|b|C|1109
8ZFI|1|b|G|1110
8ZFI|1|b|A|1111
8ZFI|1|b|G|1112

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain g

50S ribosomal protein L6