IL_8ZFI_149
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACG*CUAU
- Length
- 7 nucleotides
- Bulged bases
- 8ZFI|1|b|C|2055, 8ZFI|1|b|U|2613, 8ZFI|1|b|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFI_149 not in the Motif Atlas
- Geometric match to IL_5J7L_321
- Geometric discrepancy: 0.1389
- The information below is about IL_5J7L_321
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83389.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
8ZFI|1|b|A|2054
8ZFI|1|b|C|2055
8ZFI|1|b|G|2056
*
8ZFI|1|b|C|2612
8ZFI|1|b|U|2613
8ZFI|1|b|A|2614
8ZFI|1|b|U|2615
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain t
- 50S ribosomal protein L22
- Chain z
- eRAP-NC
Coloring options: