IL_8ZFI_156

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

8ZFI|1|b|U|2111, 8ZFI|1|b|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|G|2110
8ZFI|1|b|U|2111
8ZFI|1|b|G|2112
8ZFI|1|b|U|2113
8ZFI|1|b|A|2114
8ZFI|1|b|G|2115
8ZFI|1|b|G|2116
8ZFI|1|b|A|2117
8ZFI|1|b|U|2118
8ZFI|1|b|A|2119
8ZFI|1|b|G|2120
*
8ZFI|1|b|C|2178
8ZFI|1|b|C|2179

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain X

Transfer RNA; tRNA