IL_8ZFI_157

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|G|2124
8ZFI|1|b|G|2125
8ZFI|1|b|A|2126
8ZFI|1|b|G|2127
8ZFI|1|b|G|2128
*
8ZFI|1|b|C|2160
8ZFI|1|b|C|2161
8ZFI|1|b|G|2162
8ZFI|1|b|A|2163
8ZFI|1|b|C|2164
8ZFI|1|b|C|2165
8ZFI|1|b|U|2166
8ZFI|1|b|U|2167
8ZFI|1|b|G|2168
8ZFI|1|b|A|2169
8ZFI|1|b|A|2170
8ZFI|1|b|A|2171
8ZFI|1|b|U|2172
8ZFI|1|b|A|2173
8ZFI|1|b|C|2174

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain X

Transfer RNA; tRNA