IL_8ZFI_158

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUUGAAGUGUGG*CUGCAUGGAG

Length

23 nucleotides

Bulged bases

8ZFI|1|b|A|2158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|C|2129
8ZFI|1|b|U|2130
8ZFI|1|b|U|2131
8ZFI|1|b|U|2132
8ZFI|1|b|G|2133
8ZFI|1|b|A|2134
8ZFI|1|b|A|2135
8ZFI|1|b|G|2136
8ZFI|1|b|U|2137
8ZFI|1|b|G|2138
8ZFI|1|b|U|2139
8ZFI|1|b|G|2140
8ZFI|1|b|G|2141
*
8ZFI|1|b|C|2150
8ZFI|1|b|U|2151
8ZFI|1|b|G|2152
8ZFI|1|b|C|2153
8ZFI|1|b|A|2154
8ZFI|1|b|U|2155
8ZFI|1|b|G|2156
8ZFI|1|b|G|2157
8ZFI|1|b|A|2158
8ZFI|1|b|G|2159

Current chains

Chain b

RNA (2903-MER)

Nearby chains