IL_8ZHB_001
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZHB_001 not in the Motif Atlas
- Homologous match to IL_8CRE_001
- Geometric discrepancy: 0.1382
- The information below is about IL_8CRE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|LA|G|5
8ZHB|1|LA|A|6
8ZHB|1|LA|C|7
*
8ZHB|1|LC|G|152
8ZHB|1|LC|U|153
8ZHB|1|LC|C|154
Current chains
- Chain LA
- 25S rRNA (3393-MER)
- Chain LC
- 5.8S rRNA (158-MER)
Nearby chains
- Chain LJ
- Large ribosomal subunit protein eL8A
- Chain LP
- Large ribosomal subunit protein eL15A
- Chain LZ
- Large ribosomal subunit protein uL23
Coloring options: