IL_8ZHB_011

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUUG*UUUGUAAAG

Length

14 nucleotides

Bulged bases

8ZHB|1|LA|G|251, 8ZHB|1|LA|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|LA|C|166
8ZHB|1|LA|U|167
8ZHB|1|LA|U|168
8ZHB|1|LA|U|169
8ZHB|1|LA|G|170
*
8ZHB|1|LA|U|248
8ZHB|1|LA|U|249
8ZHB|1|LA|U|250
8ZHB|1|LA|G|251
8ZHB|1|LA|U|252
8ZHB|1|LA|A|253
8ZHB|1|LA|A|254
8ZHB|1|LA|A|255
8ZHB|1|LA|G|256

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LJ

Large ribosomal subunit protein eL8A

Chain LN

Large ribosomal subunit protein eL13A

Chain Lj

Large ribosomal subunit protein uL29A