IL_8ZHB_041
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AUUAGAG*CUAUUCU
- Length
- 14 nucleotides
- Bulged bases
- 8ZHB|1|LA|A|1039, 8ZHB|1|LA|U|1041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|LA|A|1005
8ZHB|1|LA|U|1006
8ZHB|1|LA|U|1007
8ZHB|1|LA|A|1008
8ZHB|1|LA|G|1009
8ZHB|1|LA|A|1010
8ZHB|1|LA|G|1011
*
8ZHB|1|LA|C|1037
8ZHB|1|LA|U|1038
8ZHB|1|LA|A|1039
8ZHB|1|LA|U|1040
8ZHB|1|LA|U|1041
8ZHB|1|LA|C|1042
8ZHB|1|LA|U|1043
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LB
- 5S ribosomal RNA; 5S rRNA
- Chain LG
- Large ribosomal subunit protein uL18
- Chain LL
- Large ribosomal subunit protein uL16
- Chain Ta
- Transfer RNA; tRNA
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