IL_8ZHB_045

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CAUUU*AACUG

Length

10 nucleotides

Bulged bases

8ZHB|1|LA|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|LA|C|1118
8ZHB|1|LA|A|1119
8ZHB|1|LA|U|1120
8ZHB|1|LA|U|1121
8ZHB|1|LA|U|1122
*
8ZHB|1|LA|A|1134
8ZHB|1|LA|A|1135
8ZHB|1|LA|C|1136
8ZHB|1|LA|U|1137
8ZHB|1|LA|G|1138

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LB

5S ribosomal RNA; 5S rRNA

Chain LI

Large ribosomal subunit protein uL30A

Chain LL

Large ribosomal subunit protein uL16

Chain LV

Large ribosomal subunit protein eL21A

Chain Ld

Large ribosomal subunit protein eL29