IL_8ZHB_115

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUAGUAC*GGAACAG

Length

15 nucleotides

Bulged bases

8ZHB|1|LA|C|3033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|LA|C|3017
8ZHB|1|LA|U|3018
8ZHB|1|LA|U|3019
8ZHB|1|LA|A|3020
8ZHB|1|LA|G|3021
8ZHB|1|LA|U|3022
8ZHB|1|LA|A|3023
8ZHB|1|LA|C|3024
*
8ZHB|1|LA|G|3029
8ZHB|1|LA|G|3030
8ZHB|1|LA|A|3031
8ZHB|1|LA|A|3032
8ZHB|1|LA|C|3033
8ZHB|1|LA|A|3034
8ZHB|1|LA|G|3035

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LE

Large ribosomal subunit protein uL3

Chain LK

Large ribosomal subunit protein uL6A

Chain LX

Large ribosomal subunit protein uL14A

Chain Lo

Large ribosomal subunit protein eL40A