IL_8ZHB_120
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GC*GAU
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZHB_120 not in the Motif Atlas
- Geometric match to IL_8P9A_328
- Geometric discrepancy: 0.3311
- The information below is about IL_8P9A_328
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 48
Unit IDs
8ZHB|1|LA|G|3157
8ZHB|1|LA|C|3158
*
8ZHB|1|LA|G|3290
8ZHB|1|LA|A|3291
8ZHB|1|LA|U|3292
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LE
- Large ribosomal subunit protein uL3
Coloring options: