IL_8ZHB_156
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUAUUUA*UAACUUUUC
- Length
- 16 nucleotides
- Bulged bases
- 8ZHB|1|S2|U|208, 8ZHB|1|S2|U|209, 8ZHB|1|S2|U|260, 8ZHB|1|S2|U|261
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|S2|G|204
8ZHB|1|S2|U|205
8ZHB|1|S2|A|206
8ZHB|1|S2|U|207
8ZHB|1|S2|U|208
8ZHB|1|S2|U|209
8ZHB|1|S2|A|210
*
8ZHB|1|S2|U|255
8ZHB|1|S2|A|256
8ZHB|1|S2|A|257
8ZHB|1|S2|C|258
8ZHB|1|S2|U|259
8ZHB|1|S2|U|260
8ZHB|1|S2|U|261
8ZHB|1|S2|U|262
8ZHB|1|S2|C|263
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SV
- Small ribosomal subunit protein eS8A
- Chain SX
- Small ribosomal subunit protein uS17A
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