IL_8ZHB_174
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAGGGCAAGUC*GCUCC
- Length
- 17 nucleotides
- Bulged bases
- 8ZHB|1|S2|U|558, 8ZHB|1|S2|C|589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|S2|G|548
8ZHB|1|S2|G|549
8ZHB|1|S2|A|550
8ZHB|1|S2|G|551
8ZHB|1|S2|G|552
8ZHB|1|S2|G|553
8ZHB|1|S2|C|554
8ZHB|1|S2|A|555
8ZHB|1|S2|A|556
8ZHB|1|S2|G|557
8ZHB|1|S2|U|558
8ZHB|1|S2|C|559
*
8ZHB|1|S2|G|586
8ZHB|1|S2|C|587
8ZHB|1|S2|U|588
8ZHB|1|S2|C|589
8ZHB|1|S2|C|590
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS3
- Chain SR
- Small ribosomal subunit protein uS5
- Chain SW
- Small ribosomal subunit protein uS4A
- Chain Sc
- Small ribosomal subunit protein uS12A
- Chain Sg
- Small ribosomal subunit protein eS30A
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