IL_8ZHB_182

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

ACGUUUGG*CCAUCGU

Length

15 nucleotides

Bulged bases

8ZHB|1|S2|U|820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|S2|A|817
8ZHB|1|S2|C|818
8ZHB|1|S2|G|819
8ZHB|1|S2|U|820
8ZHB|1|S2|U|821
8ZHB|1|S2|U|822
8ZHB|1|S2|G|823
8ZHB|1|S2|G|824
*
8ZHB|1|S2|C|848
8ZHB|1|S2|C|849
8ZHB|1|S2|A|850
8ZHB|1|S2|U|851
8ZHB|1|S2|C|852
8ZHB|1|S2|G|853
8ZHB|1|S2|U|854

Current chains

Chain S2

chain 2 18S rRNA (1799-MER)

Nearby chains

Chain LT

Large ribosomal subunit protein eL19A

Chain SU

Small ribosomal subunit protein eS7A