IL_8ZHB_188
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AUUGUCAG*CUUGGAUUUAU
- Length
- 19 nucleotides
- Bulged bases
- 8ZHB|1|S2|G|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|S2|A|892
8ZHB|1|S2|U|893
8ZHB|1|S2|U|894
8ZHB|1|S2|G|895
8ZHB|1|S2|U|896
8ZHB|1|S2|C|897
8ZHB|1|S2|A|898
8ZHB|1|S2|G|899
*
8ZHB|1|S2|C|910
8ZHB|1|S2|U|911
8ZHB|1|S2|U|912
8ZHB|1|S2|G|913
8ZHB|1|S2|G|914
8ZHB|1|S2|A|915
8ZHB|1|S2|U|916
8ZHB|1|S2|U|917
8ZHB|1|S2|U|918
8ZHB|1|S2|A|919
8ZHB|1|S2|U|920
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- Large ribosomal subunit protein uL2A
- Chain SQ
- Small ribosomal subunit protein eS1A
- Chain SZ
- Small ribosomal subunit protein uS11B
Coloring options: