IL_8ZHB_218
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGGAUAG*CUUCAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|S2|G|1540
8ZHB|1|S2|G|1541
8ZHB|1|S2|G|1542
8ZHB|1|S2|A|1543
8ZHB|1|S2|U|1544
8ZHB|1|S2|A|1545
8ZHB|1|S2|G|1546
*
8ZHB|1|S2|C|1565
8ZHB|1|S2|U|1566
8ZHB|1|S2|U|1567
8ZHB|1|S2|C|1568
8ZHB|1|S2|A|1569
8ZHB|1|S2|A|1570
8ZHB|1|S2|C|1571
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SB
- Small ribosomal subunit protein uS7
- Chain SH
- Small ribosomal subunit protein uS13A
- Chain SI
- Small ribosomal subunit protein eS19A
- Chain SK
- Small ribosomal subunit protein eS25A
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