IL_8ZTU_161

3D structure

PDB id

8ZTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

8ZTU|1|a|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZTU_161 not in the Motif Atlas

Geometric match to IL_4V9F_002

Geometric discrepancy: 0.2819

The information below is about IL_4V9F_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

8ZTU|1|a|C|2591
8ZTU|1|a|G|2592
*
8ZTU|1|a|C|2601
8ZTU|1|a|A|2602
8ZTU|1|a|G|2603

Current chains

Chain a

23S rRNA

Nearby chains

Chain Y

Transfer RNA; tRNA

Chain c

50S ribosomal protein L2