IL_8ZTV_025

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

8ZTV|1|A|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZTV_025 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.1065

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

8ZTV|1|A|C|569
8ZTV|1|A|G|570
8ZTV|1|A|U|571
8ZTV|1|A|A|572
8ZTV|1|A|A|573
8ZTV|1|A|A|574
8ZTV|1|A|G|575
*
8ZTV|1|A|C|880
8ZTV|1|A|G|881

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Q

30S ribosomal protein S17