IL_8ZTV_122

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZTV_122 not in the Motif Atlas

Homologous match to IL_5J7L_301

Geometric discrepancy: 0.2567

The information below is about IL_5J7L_301

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8ZTV|1|a|U|1481
8ZTV|1|a|G|1482
*
8ZTV|1|a|C|1507
8ZTV|1|a|A|1508
8ZTV|1|a|A|1509
8ZTV|1|a|G|1510

Current chains

Chain a

23S rRNA

Nearby chains