IL_9ASH_001
3D structure
- PDB id
- 9ASH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the active Lactococcus lactis Csm bound to target in post-cleavage stage
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- CUG*CAG
- Length
- 6 nucleotides
- Bulged bases
- 9ASH|1|R|U|20
- QA status
- Self-complementary: CUG,CAG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ASH|1|R|C|19
9ASH|1|R|U|20
9ASH|1|R|G|21
*
9ASH|1|T|C|22
9ASH|1|T|A|23
9ASH|1|T|G|24
Current chains
- Chain R
- CRISPR RNA
- Chain T
- Target RNA
Nearby chains
- Chain A
- CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)
- Chain C
- CRISPR system Cms protein Csm2
- Chain G
- CRISPR system Cms endoribonuclease Csm3
- Chain H
- CRISPR system Cms endoribonuclease Csm3
- Chain I
- CRISPR system Cms endoribonuclease Csm3
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