IL_9ASH_002
3D structure
- PDB id
- 9ASH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the active Lactococcus lactis Csm bound to target in post-cleavage stage
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- CAAC*GUUG
- Length
- 8 nucleotides
- Bulged bases
- 9ASH|1|R|A|26, 9ASH|1|T|U|17
- QA status
- Self-complementary: CAAC,GUUG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ASH|1|R|C|24
9ASH|1|R|A|25
9ASH|1|R|A|26
9ASH|1|R|C|27
*
9ASH|1|T|G|16
9ASH|1|T|U|17
9ASH|1|T|U|18
9ASH|1|T|G|19
Current chains
- Chain R
- CRISPR RNA
- Chain T
- Target RNA
Nearby chains
- Chain C
- CRISPR system Cms protein Csm2
- Chain D
- CRISPR system Cms protein Csm2
- Chain G
- CRISPR system Cms endoribonuclease Csm3
- Chain H
- CRISPR system Cms endoribonuclease Csm3
- Chain I
- CRISPR system Cms endoribonuclease Csm3
- Chain J
- CRISPR system Cms protein Csm5
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