3D structure

PDB id
9AX7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S initiation complex (tRNA-fMet M1 + CUG start codon)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
UAAC*GAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9AX7_064 not in the Motif Atlas
Homologous match to IL_5J7L_065
Geometric discrepancy: 0.1552
The information below is about IL_5J7L_065
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_31531.3
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
13

Unit IDs

9AX7|1|A|U|1445
9AX7|1|A|A|1446
9AX7|1|A|A|1447
9AX7|1|A|C|1448
*
9AX7|1|A|G|1455
9AX7|1|A|A|1456
9AX7|1|A|G|1457

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain T
30S ribosomal protein S20

Coloring options:


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