IL_9AX8_066
3D structure
- PDB id
- 9AX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9AX8|1|A|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AX8_066 not in the Motif Atlas
- Homologous match to IL_5J7L_308
- Geometric discrepancy: 0.0762
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9AX8|1|A|C|1686
9AX8|1|A|G|1687
9AX8|1|A|U|1688
9AX8|1|A|A|1689
9AX8|1|A|A|1690
9AX8|1|A|C|1691
*
9AX8|1|A|G|1696
9AX8|1|A|G|1697
9AX8|1|A|A|1698
9AX8|1|A|G|1699
9AX8|1|A|A|1700
9AX8|1|A|A|1701
9AX8|1|A|G|1702
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
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