IL_9AZS_128

3D structure

PDB id

9AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Post-eEF1A-AT-P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACAU*AUCGUU

Length

11 nucleotides

Bulged bases

9AZS|1|L5|A|3947, 9AZS|1|L5|A|3949

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZS|1|L5|G|3946
9AZS|1|L5|A|3947
9AZS|1|L5|C|3948
9AZS|1|L5|A|3949
9AZS|1|L5|U|3950
*
9AZS|1|L5|A|4062
9AZS|1|L5|U|4063
9AZS|1|L5|C|4064
9AZS|1|L5|G|4065
9AZS|1|L5|U|4066
9AZS|1|L5|U|4067

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a