IL_9AZS_165

3D structure

PDB id

9AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Post-eEF1A-AT-P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAAACGG*CUCGCC

Length

14 nucleotides

Bulged bases

9AZS|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZS|1|L5|G|4890
9AZS|1|L5|G|4891
9AZS|1|L5|A|4892
9AZS|1|L5|A|4893
9AZS|1|L5|A|4894
9AZS|1|L5|C|4895
9AZS|1|L5|G|4896
9AZS|1|L5|G|4897
*
9AZS|1|L5|C|4924
9AZS|1|L5|U|4925
9AZS|1|L5|C|4926
9AZS|1|L5|G|4927
9AZS|1|L5|C|4928
9AZS|1|L5|C|4929

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a