3D structure

PDB id
9AZS (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human Post-eEF1A-AT-P-E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
GGGAUCG*CAUGAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9AZS|1|S2|G|1604
9AZS|1|S2|G|1605
9AZS|1|S2|G|1606
9AZS|1|S2|A|1607
9AZS|1|S2|U|1608
9AZS|1|S2|C|1609
9AZS|1|S2|G|1610
*
9AZS|1|S2|C|1629
9AZS|1|S2|A|1630
9AZS|1|S2|U|1631
9AZS|1|S2|G|1632
9AZS|1|S2|A|1633
9AZS|1|S2|A|1634
9AZS|1|S2|C|1635

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SS
40S ribosomal protein S18
Chain ST
40S ribosomal protein S19

Coloring options:

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