IL_9B0G_022

3D structure

PDB id

9B0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class4 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9B0G|1|L5|C|685, 9B0G|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0G|1|L5|A|466
9B0G|1|L5|U|467
9B0G|1|L5|U|468
9B0G|1|L5|C|469
9B0G|1|L5|A|470
9B0G|1|L5|A|471
9B0G|1|L5|C|472
*
9B0G|1|L5|G|682
9B0G|1|L5|C|683
9B0G|1|L5|G|684
9B0G|1|L5|C|685
9B0G|1|L5|A|686
9B0G|1|L5|U|687
9B0G|1|L5|U|688
9B0G|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28