IL_9B0H_022

3D structure

PDB id

9B0H (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9B0H|1|L5|C|685, 9B0H|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0H|1|L5|A|466
9B0H|1|L5|U|467
9B0H|1|L5|U|468
9B0H|1|L5|C|469
9B0H|1|L5|A|470
9B0H|1|L5|A|471
9B0H|1|L5|C|472
*
9B0H|1|L5|G|682
9B0H|1|L5|C|683
9B0H|1|L5|G|684
9B0H|1|L5|C|685
9B0H|1|L5|A|686
9B0H|1|L5|U|687
9B0H|1|L5|U|688
9B0H|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28