IL_9B0J_023

3D structure

PDB id

9B0J (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating with CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9B0J|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0J|1|L5|A|466
9B0J|1|L5|U|467
9B0J|1|L5|U|468
9B0J|1|L5|C|469
9B0J|1|L5|A|470
9B0J|1|L5|A|471
9B0J|1|L5|C|472
*
9B0J|1|L5|G|682
9B0J|1|L5|C|683
9B0J|1|L5|G|684
9B0J|1|L5|C|685
9B0J|1|L5|A|686
9B0J|1|L5|U|687
9B0J|1|L5|U|688
9B0J|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28