IL_9B0N_011

3D structure

PDB id

9B0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Post-eEF1A-AT-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

9B0N|1|L5|C|183, 9B0N|1|L5|G|186, 9B0N|1|L5|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0N|1|L5|C|180
9B0N|1|L5|C|181
9B0N|1|L5|G|182
9B0N|1|L5|C|183
9B0N|1|L5|U|184
9B0N|1|L5|C|185
9B0N|1|L5|G|186
9B0N|1|L5|U|187
9B0N|1|L5|G|188
9B0N|1|L5|G|189
*
9B0N|1|L5|C|252
9B0N|1|L5|G|253
9B0N|1|L5|G|254
9B0N|1|L5|C|255
9B0N|1|L5|G|256

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein eL13

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37