IL_9B0N_028

3D structure

PDB id

9B0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Post-eEF1A-AT-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GCCCGG*UCC

Length

9 nucleotides

Bulged bases

9B0N|1|L5|C|501, 9B0N|1|L5|C|502, 9B0N|1|L5|C|503, 9B0N|1|L5|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0N|1|L5|G|500
9B0N|1|L5|C|501
9B0N|1|L5|C|502
9B0N|1|L5|C|503
9B0N|1|L5|G|504
9B0N|1|L5|G|505
*
9B0N|1|L5|U|653
9B0N|1|L5|C|654
9B0N|1|L5|C|655

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18